Indiana University

 

Indiana University Cyberinfrastructure News

  1. IU staff have collaborated with Professor Sorin Matei of Purdue
    University to develop an extension of the Visible Past project. The
    prototype builds upon an existing digital model of an Omaha Beach
    battlefield developed by Dr. Matei, as well as the open X3D data
    standard and the free instantreality renderer.

    The goal of the effort was to transform the 3D model into a gateway
    to a spatially oriented gWiki platform developed by Dr. Matei. The
    prototype was demonstrated to a group from the recent Museums and
    the Web 2009 Conference, during an AVL facilities tour on the
    Indianapolis campus.

    For more information on the AVL, please see

    http://avl.iu.edu

    For more information on the Visible Past project, please see

    http://visiblepast.net

  2. Indiana University Bloomington faculty member Amit Hagar has
    received a National Science Foundation Scholar Award to support
    research related to quantum computing, a potentially revolutionary
    field whose development has excited scientists.

    Hagar, an assistant professor in the Department of History and
    Philosophy of Science in the College of Arts and Sciences, will
    undertake a project titled "The Complexity of Noise: A
    Philosophical Outlook on Fault-Tolerant Quantum Computation."

    Read more at

    http://newsinfo.iu.edu/news/page/normal/10885.html

  3. The efforts of IU faculty members to create educational software
    nine years ago paid off as the University's largest commercial
    transaction. Blackboard Inc., an educational software provider,
    announced last week it will purchase ANGEL Learning, the
    educational software produced from IU technology, for $100 million.

    ANGEL Learning software serves as an educational tool for students
    and teachers to track academic progress and manage teaching and
    learning goals. The software offers products varying from
    technology to computer-generated material.

    Because the University produced the software almost a decade ago,
    it has continued to invest in ANGEL Learning's research and
    technology. Along with IU investments in ANGEL Learning and
    Research and Technology Corporation, the University will gain
    $23 million in proceeds from the sale, which will be reinvested
    for technological research and innovative programs.

    Read more:

    http://homepages.indiana.edu/web/page/normal/10948.html

  4. Migrating science and engineering software to multi-core,
    heterogeneous petascale computers poses many challenges. One is to
    expand the knowledge of our technical workforce so that they can
    make efficient use of such systems.

    A questionnaire has been created, to seek your advice on these
    topics. The results will be compile and circulated to the HPC
    community. To participate, please visit

    http://www.rrscs.org/survey/petascale.shtml

  5. The National Science Foundation (NSF), recognizing the importance
    of attracting and retaining talented young individuals in the
    computing research and education enterprise, has asked for help.

    * The new Computing Innovation Fellows (CIFellows) project supports
    appointment of up to 60 CIFellows in organizations dedicated to
    advancing computing. To be eligible to apply for CIFellows support,
    applicants must have completed their Ph.D.s between May 1, 2008 and
    August 31, 2009. Please note that time is of the essence --
    applications are due by June 9, 2009. More information about the
    CIFellows project is available at

    http://cifellows.org/

    * The Graduate Research Fellowships program has been doubled this
    year, and it appears that there is not a sufficient numbers of
    qualified applications at this time. Please encourage promising
    undergraduates and first year graduate students to submit an
    application. More information on this program is available at

    http://nsf.gov/funding/pgm_summ.jsp?pims_id=6201

    * The Research Experiences for Undergraduates program has been
    increased by approximately 50%. More information can be found at

    http://www.nsf.gov/funding/pgm_summ.jsp?pims_id=5517

  6. Indiana high school students with an interest in computers and
    networking can work side by side with IU technology professionals
    to build a robot and compete against other teams during a hands-on
    workshop sponsored by the IU Pervasive Technology Institute.
    Researchers from the Center for Applied Cybersecurity Research's
    Advanced Network Management Lab (ANML) will lead the third annual
    Summer Technology Workshop. The program will introduce terms and
    concepts related to system control, security, and programming.
    Participants will learn how those concepts can be applied to the
    robot, and also how an illegitimate user might attempt to reprogram
    a robot for malicious purposes. Participants will learn how network
    security professionals identify and prevent similar malicious
    activities.

    The workshop takes place on Friday, June 19 from 9:30am to 3:30pm.
    Registration is open to students entering Indiana high school this
    fall. There is no cost for registration, but space is limited to
    twelve students. Lunch will be provided.

    To register for the conference, please call (812)855-9220 or email
    reachptl@indiana.edu

  7. A workshop on the DOE Advanced Computational Software (ACTS),
    "Leveraging the Development of Computational Science & Engineering
    Software Through Sustainable High Performance Tools," will be held
    August 18-21, 2009 in Berkeley, CA. The four-day workshop will
    present an introduction to the ACTS Collection for application
    scientists whose work includes a combination of large computations,
    complex software integration, distributed computing, and robust
    numerical algorithms.

    This workshop is open to computational scientists from industry,
    academia and national labs. Registration fees are fully sponsored
    by the DOE's Office of Science. In addition, DOE will sponsor
    travel expenses for a limited number of graduate students and
    postdoctoral fellows. This support includes transportation, lodging,
    breakfasts, lunches and workshop materials.

    The application submission deadline is June 26, 2009. For more
    information see

    http://acts.nersc.gov/events/Workshop2009/

  8. The 2009 TeraGrid Conference will showcase the capabilities,
    achievements, and impact of the TeraGrid in research and education
    through presentations, posters, visualizations, and more. The
    conference will also provide information and training to enable
    current and future users to achieve maximum impact. TG'09 will be
    held June 22-25 in Arlington, VA.

    For more information see the TG'09 web site:

    http://www.teragrid.org/tg09/

  9. Bioinformatics is the science of managing, mining, and extracting
    knowledge from biological sequences and structures. The goal of
    this Workshop is to present the latest research in high–performance
    computing applied to bioinformatics.

    The Parallel Bio-Computing Workshop will be held in conjunction
    with the Seventh International Conference on Parallel Processing
    and Applied Mathematics (PPAM 2009) in Wroclaw (Breslau), Poland,
    September 13-16, 2009.

    Topics of interest include but are not limited to:

    * Bioinformatic databases
    * Computational genomics and proteomics
    * DNA assembly, clustering, and mapping
    * Gene expression and microarrays
    * Gene identification and annotation
    * Molecular sequence analysis
    * Phylogeny reconstruction algorithms
    * Protein structure prediction and modelling
    * Parallel algorithms for biological analysis
    * Parallel architectures for biological applications
    * System tools that support high performance bio-computing

    Papers should be submitted by April 10, 2009. For more information,
    please visit the PBC web page:

    http://www.ppam.pl/pbc

  10. Lunch time with SysAdmins - Talk to the experts!

    You're invited to stop by and visit with the system administrators
    who run IU's supercomputers, Big Red and Quarry, two of the most
    powerful supercomputers in the world. Ask questions, share ideas,
    or just chat in an informal setting. This is an opportunity for
    you to learn how these centralized research computing resources
    can help support your work. The location changes each month.

    * Simon Hall Gill Conference Center Anteroom
    * Monday, June 8 11am-1pm

    --------

    There will be no Research Technologies Round Table in June.

  11. * Libra Cluster to retire June 30th

    The Libra Cluster, which has been in service since 2005, will be
    retired on June 30, 2009. Accounts are available on the newer
    Quarry cluster, a general-purpose Unix computing environment.

    The Research Database Cluster (RDC) is not included in this
    retirement, and will remain in service.

    The following software will be disabled on Libra on June 1, 2009:

    - The NAG Programming Libraries, Visualization and Tools, the IMSL
    Libraries and the Climate Data Operators (CDO) are now available on
    Quarry;

    - Simwalk2 and Merlin are now available on BigRed.

    If you have questions about compilers, programming, subroutine
    libraries, or debuggers, contact the High Performance Applications
    team, hpahelp@indiana.edu.

    For more details, and advice on how to transfer your files from
    Libra to Quarry, see:

    https://kb.iu.edu/data/axst.html

     

    The maintenance window for Big Red, Libra and Quarry
    is the first Tuesday of each month, 7am - 7pm EDT.

    The maintenance window for the Mass Store and Research File System
    is every Sunday 7-10AM.

    Outage reports are available online at:

    * http://racinfo.indiana.edu/hps/research/bigred/outages.shtml
    * http://racinfo.indiana.edu/hps/research/libra/outages.shtml
    * http://racinfo.indiana.edu/hps/research/quarry/outages.shtml

  12. If you have questions pertaining to IU's cyberinfrastructure, or you
    are encountering some difficulty, there are several ways to obtain
    help.

    The IU Knowledge Base (http://kb.iu.edu) is an excellent source of
    answers on how to do things.

    An introduction and overview titled "Indiana University's
    CyberInfrastructure: The least you need to know" is available at

    http://rtinfo.uits.indiana.edu/documentation/

    For more information, go to:

    * http://rtinfo.uits.indiana.edu/
    * http://racinfo.indiana.edu/hps/


    If you have problems which the KB does not enable you to solve,
    questions about system outages, or if you just have a problem and
    you don't know who to contact, send email to
    researchtechnologies@iu.edu.